TSS: Hg 102409.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=2602 |entrez_id=55342 |gc_percent=0.452736 |gene_alias=HEL162|ILF3L|SPNR|p74 |gene_description=spermatid perinuclear RNA bindin...") |
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{{TSSDetail | {{TSSDetail | ||
|ILF3L= | |||
|SPNR= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=2624 | |||
|end=123265979 | |||
|end_of_center_position=123265963 | |||
|entrez_id=55342 | |entrez_id=55342 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=HEL162 | |gene_alias=HEL162{{!}}ILF3L{{!}}SPNR{{!}}p74 | ||
|gene_description=spermatid perinuclear RNA binding protein | |gene_description=spermatid perinuclear RNA binding protein | ||
|gene_name=STRBP | |gene_name=STRBP | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_018387 | |nearest_refseq=NM_018387 | ||
|nearest_unigene=Hs.287659 | |nearest_unigene=Hs.287659 | ||
|num_trans=0 | |||
|p74= | |||
|species=human | |||
|start=123265945 | |||
|start_of_center_position=123265962 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102409.1 | |tss_id=hg_102409.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:03, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2624 |
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| Nearest PromoterID: | NM_018387 |
| Entrez ID: | 55342 |
| Nearest Unigene: | Hs.287659 |
| Nearest Refseq: | NM_018387 |
| Nearest Ensembl: | ENSG00000165209 |
| Gene Name: | STRBP |
| Gene Alias: | HEL162|ILF3L|SPNR|p74 |
| Gene Description: | spermatid perinuclear RNA binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |