TSS: Hg 102420.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=18 |entrez_id=100505588 |gc_percent=0.621891 |gene_alias=- |gene_description=uncharacterized LOC100505588 |gene_name=LOC1005055...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=124009396 | |||
|end_of_center_position=124009379 | |||
|entrez_id=100505588 | |entrez_id=100505588 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100505588 | |gene_description=uncharacterized LOC100505588 | ||
|gene_name=LOC100505588 | |gene_id=100505588 | ||
|gene_name=uncharacterized LOC100505588 | |||
|gene_source=EntrezGene:100505588 | |||
|gene_symbol=LOC100505588 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |||
|nearest_ensembl=ENSG00000236668 | |nearest_ensembl=ENSG00000236668 | ||
|nearest_promoter_id=NR_135129 | |nearest_promoter_id=NR_135129 | ||
|nearest_refseq=NR_135129 | |nearest_refseq=NR_135129 | ||
|nearest_unigene=Hs.547168 | |nearest_unigene=Hs.547168 | ||
|num_trans=100505588 | |||
|species=human | |||
|start=124009360 | |||
|start_of_center_position=124009378 | |||
|strand=- | |||
|transcript_name=ENST00000453529.2 | |||
|tss_classification=yes | |||
|tss_id=hg_102420.1 | |tss_id=hg_102420.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NR_135129 |
| Entrez ID: | 100505588 |
| Nearest Unigene: | Hs.547168 |
| Nearest Refseq: | NR_135129 |
| Nearest Ensembl: | ENSG00000236668 |
| Gene Name: | uncharacterized LOC100505588 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100505588 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.