TSS: Hg 102422.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=29416 |entrez_id=5695 |gc_percent=0.39801 |gene_alias=Z |gene_description=proteasome subunit beta 7 |gene_name=PSMB7 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=29385 | |||
|end=124386062 | |||
|end_of_center_position=124386058 | |||
|entrez_id=5695 | |entrez_id=5695 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_002799 | |nearest_refseq=NM_002799 | ||
|nearest_unigene=Hs.213470 | |nearest_unigene=Hs.213470 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=124386052 | |||
|start_of_center_position=124386057 | |||
|strand=- | |||
|tata_box=-95(TTTTTTAAGGAG,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102422.1 | |tss_id=hg_102422.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:03, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 29385 |
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| Nearest PromoterID: | NM_002799 |
| Entrez ID: | 5695 |
| Nearest Unigene: | Hs.213470 |
| Nearest Refseq: | NM_002799 |
| Nearest Ensembl: | ENSG00000136930 |
| Gene Name: | PSMB7 |
| Gene Alias: | Z |
| Gene Description: | proteasome subunit beta 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -95(TTTTTTAAGGAG,+,0.00) |