TSS: Hg 102443.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-59792 |entrez_id=100379345 |gc_percent=0.288557 |gene_alias=- |gene_description=MIR181A2 host gene |gene_name=MIR181A2HG |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=-59792 | |distance_to_tss=-59792 | ||
|end=124598648 | |||
|end_of_center_position=124598644 | |||
|entrez_id=100379345 | |entrez_id=100379345 | ||
|gc_percent=0.288557 | |gc_percent=0.288557 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_038975 | |nearest_refseq=NR_038975 | ||
|nearest_unigene=Hs.660412 | |nearest_unigene=Hs.660412 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=124598639 | |||
|start_of_center_position=124598643 | |||
|strand=- | |||
|tata_box=57(CGTTATATAAAG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102443.1 | |tss_id=hg_102443.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 18:25, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -59792 |
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| Nearest PromoterID: | NR_038975 |
| Entrez ID: | 100379345 |
| Nearest Unigene: | Hs.660412 |
| Nearest Refseq: | NR_038975 |
| Nearest Ensembl: | ENSG00000224020 |
| Gene Name: | MIR181A2HG |
| Gene Alias: | - |
| Gene Description: | MIR181A2 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.288557 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 57(CGTTATATAAAG,-,0.00) |