TSS: Hg 102445.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=837 |entrez_id=2649 |gc_percent=0.59204 |gene_alias=CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR |gene_description=nuclear receptor sub...") |
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{{TSSDetail | {{TSSDetail | ||
|GCNF= | |||
|GCNF1= | |||
|NR61= | |||
|RTR= | |||
|chr=chr9 | |||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=838 | |||
|end=124770482 | |||
|end_of_center_position=124770473 | |||
|entrez_id=2649 | |entrez_id=2649 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=CT150 | |gene_alias=CT150{{!}}GCNF{{!}}GCNF1{{!}}NR61{{!}}RTR{{!}}hGCNF{{!}}hRTR | ||
|gene_description=nuclear receptor subfamily 6 group A member 1 | |gene_description=nuclear receptor subfamily 6 group A member 1 | ||
|gene_name=NR6A1 | |gene_name=NR6A1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hGCNF= | |||
|hRTR= | |||
|nearest_ensembl=ENSG00000148200 | |nearest_ensembl=ENSG00000148200 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001278546 | ||
|nearest_refseq=NM_001489 | |nearest_refseq=NM_001489 | ||
|nearest_unigene=Hs.20131 | |nearest_unigene=Hs.20131 | ||
|num_trans=0 | |||
|species=human | |||
|start=124770463 | |||
|start_of_center_position=124770472 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102445.1 | |tss_id=hg_102445.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:03, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 838 |
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| Nearest PromoterID: | NM_001278546 |
| Entrez ID: | 2649 |
| Nearest Unigene: | Hs.20131 |
| Nearest Refseq: | NM_001489 |
| Nearest Ensembl: | ENSG00000148200 |
| Gene Name: | NR6A1 |
| Gene Alias: | CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR |
| Gene Description: | nuclear receptor subfamily 6 group A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |