TSS: Hg 102485.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=60293 |entrez_id=26130 |gc_percent=0.492537 |gene_alias=GAPEX5|GAPex-5|RAP6 |gene_description=GTPase activating protein and VPS9 do...") |
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{{TSSDetail | {{TSSDetail | ||
|GAPex-5= | |||
|RAP6= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=97357 | |||
|end=125359183 | |||
|end_of_center_position=125359183 | |||
|entrez_id=26130 | |entrez_id=26130 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=GAPEX5 | |gene_alias=GAPEX5{{!}}GAPex-5{{!}}RAP6 | ||
|gene_description=GTPase activating protein and VPS9 domains 1 | |gene_description=GTPase activating protein and VPS9 domains 1 | ||
|gene_name=GAPVD1 | |gene_name=GAPVD1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165219 | |nearest_ensembl=ENSG00000165219 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_148733 | ||
|nearest_refseq=NM_015635 | |nearest_refseq=NM_015635 | ||
|nearest_unigene=Hs.42376 | |nearest_unigene=Hs.42376 | ||
|num_trans=0 | |||
|species=human | |||
|start=125359182 | |||
|start_of_center_position=125359182 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102485.1 | |tss_id=hg_102485.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:04, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 97357 |
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| Nearest PromoterID: | NR_148733 |
| Entrez ID: | 26130 |
| Nearest Unigene: | Hs.42376 |
| Nearest Refseq: | NM_015635 |
| Nearest Ensembl: | ENSG00000165219 |
| Gene Name: | GAPVD1 |
| Gene Alias: | GAPEX5|GAPex-5|RAP6 |
| Gene Description: | GTPase activating protein and VPS9 domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |