TSS: Mm 148306.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_045361:0 uc029tqk.1:0 AK007141:0 |chr=chr18 |cpg_percent=0.075 |distance=0 |distance_to_tss=9 |end=83325886 |entrez_id=70960 |gc_percent=0.597015 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1918210 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=9 | |distance_to_tss=9 | ||
|end=83325886 | |end=83325886 | ||
|end_of_center_position=83325875 | |||
|entrez_id=70960 | |entrez_id=70960 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:1918210 | |hgnc_mgi_id=MGI:1918210 | ||
|nearest_ensembl= | |nearest_ensembl=ENSMUSG00000118333 | ||
|nearest_promoter_id=NR_045361 | |nearest_promoter_id=NR_045361 | ||
|nearest_refseq=NR_045361 | |nearest_refseq=NR_045361 | ||
|nearest_unigene=Mm.410834 | |nearest_unigene=Mm.410834 | ||
|num_trans= | |num_trans=70960 | ||
|species=mouse | |species=mouse | ||
|start=83325863 | |start=83325863 | ||
|start_of_center_position=83325874 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENSMUST00000236997.1 AK007141 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_148306.1 | |tss_id=mm_148306.1 | ||
Latest revision as of 04:11, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9 |
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| Nearest PromoterID: | NR_045361 |
| Entrez ID: | 70960 |
| Nearest Unigene: | Mm.410834 |
| Nearest Refseq: | NR_045361 |
| Nearest Ensembl: | ENSMUSG00000118333 |
| Gene Name: | RIKEN cDNA 4921531P14 gene |
| Gene Alias: | 1700108N05Rik |
| Gene Description: | RIKEN cDNA 4921531P14 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.