TSS: Hg 102516.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=-61963 | |distance_to_tss=-61963 | ||
|end=126472468 | |||
|end_of_center_position=126472468 | |||
|entrez_id=641373 | |entrez_id=641373 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=NCRNA00194 | |gene_alias=NCRNA00194 | ||
|gene_description= | |gene_description=non-coding repressor of NFAT | ||
|gene_name=NRON | |gene_name=NRON | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_045006 | |nearest_refseq=NR_045006 | ||
|nearest_unigene=Hs.742606 | |nearest_unigene=Hs.742606 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=126472466 | |||
|start_of_center_position=126472467 | |||
|strand=- | |||
|tata_box=-48(CTATTTTAAAGG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102516.1 | |tss_id=hg_102516.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:05, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -61963 |
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| Nearest PromoterID: | NR_045006 |
| Entrez ID: | 641373 |
| Nearest Unigene: | Hs.742606 |
| Nearest Refseq: | NR_045006 |
| Nearest Ensembl: | |
| Gene Name: | NRON |
| Gene Alias: | NCRNA00194 |
| Gene Description: | non-coding repressor of NFAT |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -48(CTATTTTAAAGG,-,0.00) |