TSS: Hg 102520.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-80374 |entrez_id=4010 |gc_percent=0.61194 |gene_alias=LMX1.2|NPS1 |gene_description=LIM homeobox transcription factor 1 beta |...") |
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{{TSSDetail | {{TSSDetail | ||
|NPS1= | |||
|chr=chr9 | |||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=NA | |||
|distance_to_tss=-80374 | |distance_to_tss=-80374 | ||
|end=126534074 | |||
|end_of_center_position=126534070 | |||
|entrez_id=4010 | |entrez_id=4010 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=LMX1.2 | |gene_alias=LMX1.2{{!}}NPS1 | ||
|gene_description=LIM homeobox transcription factor 1 beta | |gene_description=LIM homeobox transcription factor 1 beta | ||
|gene_name=LMX1B | |gene_name=LMX1B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136944 | |nearest_ensembl=ENSG00000136944 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001174146 | ||
|nearest_refseq=NM_002316 | |nearest_refseq=NM_002316 | ||
|nearest_unigene=Hs.129133 | |nearest_unigene=Hs.129133 | ||
|num_trans=0 | |||
|species=human | |||
|start=126534064 | |||
|start_of_center_position=126534069 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102520.1 | |tss_id=hg_102520.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 17:05, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -80374 |
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Nearest PromoterID: | NM_001174146 |
Entrez ID: | 4010 |
Nearest Unigene: | Hs.129133 |
Nearest Refseq: | NM_002316 |
Nearest Ensembl: | ENSG00000136944 |
Gene Name: | LMX1B |
Gene Alias: | LMX1.2|NPS1 |
Gene Description: | LIM homeobox transcription factor 1 beta |
Gene Type: | protein-coding |
CpG%: | 0.055 |
GC%: | 0.61194 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |