TSS: Hg 102544.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MEG-3= | |||
|MINERVA= | |||
|OC58= | |||
|bA356B19.6= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=29512 | |||
|end=127539573 | |||
|end_of_center_position=127539562 | |||
|entrez_id=64855 | |entrez_id=64855 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=C9orf88 | |gene_alias=C9orf88{{!}}FAM129B{{!}}MEG-3{{!}}MINERVA{{!}}OC58{{!}}bA356B19.6 | ||
|gene_description= | |gene_description=niban apoptosis regulator 2 | ||
|gene_name= | |gene_name=NIBAN2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136830 | |nearest_ensembl=ENSG00000136830 | ||
Line 12: | Line 20: | ||
|nearest_refseq=NM_022833 | |nearest_refseq=NM_022833 | ||
|nearest_unigene=Hs.522401 | |nearest_unigene=Hs.522401 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=127539549 | |||
|start_of_center_position=127539561 | |||
|strand=- | |||
|tata_box=-43(CCATTTTAAAGG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102544.1 | |tss_id=hg_102544.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 17:06, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 29512 |
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Nearest PromoterID: | NM_022833 |
Entrez ID: | 64855 |
Nearest Unigene: | Hs.522401 |
Nearest Refseq: | NM_022833 |
Nearest Ensembl: | ENSG00000136830 |
Gene Name: | NIBAN2 |
Gene Alias: | C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 |
Gene Description: | niban apoptosis regulator 2 |
Gene Type: | protein-coding |
CpG%: | 0.03 |
GC%: | 0.552239 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -43(CCATTTTAAAGG,-,0.00) |