TSS: Rfmm 70610.1: Difference between revisions

Latest revision as of 03:20, 20 March 2025

Basic information about the TSS

TSS ID:	rfmm_70610.1
Species:	mouse
Chr:	chr7

Start:	97794680
End:	97794686
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AK133724:0
GeneID:	18378
HGNC/MGI_ID:	MGI:97436
UniProt_ID:	Q3UZQ4
Nearer transcript ids and distances:	LF196447:5 MA432024:5 BC058228:6 ENSMUST00000098281.4:-23 NM_011010.2:26 BC046600:26 BC132327:27 BC138222:27 view more...

Gene_name:	olfactory marker protein
Gene_symbol:	Omp
Gene_synonyms:
Gene_source:	MGI:97436

TATA-Box annotation

Distance to TSS:	-29
Nearest PromoterID:	NM_011010.2
Entrez ID:	Omp
Nearest Unigene:	NM_011010
Nearest Refseq:
Nearest Ensembl:
Gene Name:	olfactory marker protein
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=AK133724:0 LF196447:5 MA432024:5 BC058228:6 ENSMUST00000098281.4:-23 NM_011010.2:26 BC046600:26 BC132327:27 BC138222:27
 |annotation=promoter-TSS (NM_011010.2)
 |ccre_category=N
@@ Line 15: / Line 16: @@
 |gene_description=
 |gene_id=18378
-|gene_name=Omp
+|gene_name=olfactory marker protein
 |gene_source=MGI:97436
 |gene_symbol=Omp
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_011010.2
 |nearest_refseq=
+|nearest_transcripts=LF196447:5 MA432024:5 BC058228:6 ENSMUST00000098281.4:-23 NM_011010.2:26 BC046600:26 BC132327:27 BC138222:27
 |nearest_unigene=NM_011010
 |peak_score=1