TSS: Mm 157335.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chrX |cpg_percent=0.035 |distance= |distance_to_tss=89152 |end=36492637 |entrez_id=621901 |gc_percent=0.507463 |gene_alias=EG621901 |gene_description=predicte...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_001370943:0 | |||
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=6 | ||
|end=36492637 | |end=36492637 | ||
|entrez_id= | |end_of_center_position=36492629 | ||
|entrez_id=101055983 | |||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias= | |gene_alias=Kiaa1210 | ||
|gene_description=predicted gene | |gene_description=predicted gene 14569 | ||
|gene_name= | |gene_id=101055983 | ||
|gene_type= | |gene_name=predicted gene 14569 | ||
|nearest_ensembl= | |gene_source=MGI:3705243 | ||
|nearest_promoter_id= | |gene_symbol=Gm14569 | ||
|nearest_refseq= | |gene_synonyms= | ||
|nearest_unigene= | |gene_type=protein-coding | ||
|num_trans= | |hgnc_mgi_id=MGI:3705243 | ||
|nearest_ensembl=ENSMUSG00000091556 | |||
|nearest_promoter_id=NM_001370943 | |||
|nearest_refseq=NM_001370943 | |||
|nearest_unigene= | |||
|num_trans=1 | |||
|species=mouse | |species=mouse | ||
|start=36492620 | |start=36492620 | ||
|start_of_center_position=36492628 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-36(TTTTTTAAAAGG,-,0.00),-35(TTTTTAAAAGGG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_157335.1 | |tss_id=mm_157335.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 07:30, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6 |
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| Nearest PromoterID: | NM_001370943 |
| Entrez ID: | 101055983 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001370943 |
| Nearest Ensembl: | ENSMUSG00000091556 |
| Gene Name: | predicted gene 14569 |
| Gene Alias: | Kiaa1210 |
| Gene Description: | predicted gene 14569 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(TTTTTTAAAAGG,-,0.00),-35(TTTTTAAAAGGG,+,0.00) |
TSS expression
Expression data not found.