TSS: Rfmm 96249.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENSMUST00000218393.2:-298 | |||
|annotation=exon (NM_019553.2, exon 8 of 15) | |annotation=exon (NM_019553.2, exon 8 of 15) | ||
|ccre_category=N | |ccre_category=N | ||
| Line 15: | Line 16: | ||
|gene_description= | |gene_description= | ||
|gene_id=56200 | |gene_id=56200 | ||
|gene_name= | |gene_name=DExD box helicase 21 | ||
|gene_source=MGI:1860494 | |gene_source=MGI:1860494 | ||
|gene_symbol=Ddx21 | |gene_symbol=Ddx21 | ||
| Line 25: | Line 26: | ||
|nearest_promoter_id=XM_006514192.5 | |nearest_promoter_id=XM_006514192.5 | ||
|nearest_refseq= | |nearest_refseq= | ||
|nearest_transcripts= | |||
|nearest_unigene=NM_028197 | |nearest_unigene=NM_028197 | ||
|peak_score=1 | |peak_score=1 | ||
Latest revision as of 10:27, 20 March 2025
Basic information about the TSS
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| Source datasets | PRJDB10397 | |||||||||||||
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| Protocol | C1CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -10795 |
|---|---|
| Nearest PromoterID: | XM_006514192.5 |
| Entrez ID: | Kifbp |
| Nearest Unigene: | NM_028197 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | DExD box helicase 21 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.030303 |
| GC%: | 0.529412 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.