Template: TSSDetailV4: Difference between revisions

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{{#set:ccre_category={{{ccre_category|}}}}}
{{#set:ccre_category={{{ccre_category|}}}}}
{{#set:reftss_version={{{reftss_version|}}}}}
{{#set:reftss_version={{{reftss_version|}}}}}
{{#set:source_datasets={{{source_datasets|}}}}}
{{#set:methods={{{methods|}}}}}
[[Category:TSS_IDs]]
[[Category:TSS_IDs]]

Latest revision as of 16:57, 17 May 2024

Basic information about the TSS


TSS ID:{{{tss_id}}}
Species:
Chr:
Start:
End:
Strand:
Source datasets
Protocol
TSS cluster detected*

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:
Category:

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:
Nearest PromoterID:
Entrez ID:
Nearest Unigene:
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Description:
Gene Type:
CpG%:
GC%:
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):