TSS: Rfhg 10121.1: Difference between revisions
From referenceTSS
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|gene_description=amylase alpha 1A (salivary) | |gene_description=amylase alpha 1A (salivary) | ||
|gene_id=278 | |gene_id=278 | ||
|gene_name= | |gene_name=amylase alpha 1C | ||
|gene_source=HGNC:476 | |gene_source=HGNC:476 | ||
|gene_symbol=AMY1C | |gene_symbol=AMY1C | ||
| Line 35: | Line 35: | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000683532 | |transcript_name=ENST00000683532.1 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_10121.1 | |tss_id=rfhg_10121.1 | ||
Latest revision as of 11:28, 13 March 2025
Basic information about the TSS
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| Source datasets | EPD | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | TSS_database | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_001008221 |
| Entrez ID: | 276 |
| Nearest Unigene: | Hs.655232 |
| Nearest Refseq: | NM_004038 |
| Nearest Ensembl: | ENSG00000237763 |
| Gene Name: | amylase alpha 1C |
| Gene Alias: | AMY1 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 1.000000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.