TSS: Rfhg 112050.1: Difference between revisions

Latest revision as of 14:48, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_112050.1
Species:	human
Chr:	chr8

Start:	140718633
End:	140718641
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D4158407,EH38E2673173)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_001352749.2:64 NM_001352750.2:64 NM_001352751.2:64 NM_001352752.2:64
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000430260.6:-93 AK301557:272 ENST00000521562.5:278 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-68
Nearest PromoterID:	NM_001352751
Entrez ID:	5747
Nearest Unigene:	Hs.395482
Nearest Refseq:	NM_005607
Nearest Ensembl:	ENSG00000169398
Gene Name:
Gene Alias:	FADK\|FAK\|FAK1\|FRNK\|PPP1R71\|p125FAK\|pp125FAK
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=protein tyrosine kinase 2
 |gene_id=
-|gene_name=PTK2
+|gene_name=
 |gene_source=
 |gene_symbol=