TSS: Mm 160738.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000020549.3:142 NM_008504:142 NR_126325:142 NM_001302485:142 uc007fzj.2:142 uc011xhx.2:142 uc011xhy.2:142 AB015728:142 BC139217:273 BC139218:27...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |MMET-1= | ||
|all_trans=MGI:99549 | |||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-142 | |distance_to_tss=-142 | ||
|end=79688878 | |end=79688878 | ||
|end_of_center_position=79688878 | |||
|entrez_id=16904 | |entrez_id=16904 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=Lmet1 | |gene_alias=Lmet1{{!}}MMET-1 | ||
|gene_description=granzyme M (lymphocyte met-ase 1) | |gene_description=granzyme M (lymphocyte met-ase 1) | ||
|gene_id=16904 | |gene_id=16904 | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=MGI:99549 | |hgnc_mgi_id=MGI:99549 | ||
|nearest_ensembl=ENSMUSG00000054206 | |nearest_ensembl=ENSMUSG00000054206 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_008504 | ||
|nearest_refseq=NM_008504 | |nearest_refseq=NM_008504 | ||
|nearest_unigene=Mm.378960 | |nearest_unigene=Mm.378960 | ||
|num_trans= | |num_trans=16904 | ||
|species=mouse | |species=mouse | ||
|start=79688877 | |start=79688877 | ||
|start_of_center_position=79688877 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000020549.3 | |transcript_name=ENSMUST00000020549.3 AB015728 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_160738.1 | |tss_id=mm_160738.1 | ||
Latest revision as of 08:45, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -142 |
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| Nearest PromoterID: | NM_008504 |
| Entrez ID: | 16904 |
| Nearest Unigene: | Mm.378960 |
| Nearest Refseq: | NM_008504 |
| Nearest Ensembl: | ENSMUSG00000054206 |
| Gene Name: | granzyme M (lymphocyte met-ase 1) |
| Gene Alias: | Lmet1|MMET-1 |
| Gene Description: | granzyme M (lymphocyte met-ase 1) |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.