TSS: Rfhg 121377.1: Difference between revisions
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|gene_description=CCDC183 antisense RNA 1 | |gene_description=CCDC183 antisense RNA 1 | ||
|gene_id=100131193 | |gene_id=100131193 | ||
|gene_name=CCDC183 | |gene_name=CCDC183 antisense RNA 1 | ||
|gene_source=HGNC:44105 | |gene_source=HGNC:44105 | ||
|gene_symbol=CCDC183-AS1 | |gene_symbol=CCDC183-AS1 | ||
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|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000414656 | |transcript_name=ENST00000414656.1 AK055547 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_121377.1 | |tss_id=rfhg_121377.1 | ||
Latest revision as of 17:42, 13 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS,CTCF-bound (EH38D4252841,EH38E2737182) |
|---|---|
| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 266 |
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| Nearest PromoterID: | NR_024580 |
| Entrez ID: | 100131193 |
| Nearest Unigene: | Hs.734812 |
| Nearest Refseq: | NR_024580 |
| Nearest Ensembl: | ENSG00000228544 |
| Gene Name: | CCDC183 antisense RNA 1 |
| Gene Alias: | KIAA1984-AS1 |
| Gene Type: | ncRNA |
| CpG%: | 0.179487 |
| GC%: | 0.775000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.