TSS: Hg 100060.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-7275 |entrez_id=158326 |gc_percent=0.502488 |gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 |gene_description=FRAS1...") |
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{{TSSDetail | {{TSSDetail | ||
|C9orf143= | |||
|C9orf145= | |||
|C9orf154= | |||
|MOTA= | |||
|TILRR= | |||
|TRIGNO2= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=NA | |||
|distance_to_tss=-7275 | |distance_to_tss=-7275 | ||
|end=14918272 | |||
|end_of_center_position=14918271 | |||
|entrez_id=158326 | |entrez_id=158326 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=BNAR | |gene_alias=BNAR{{!}}C9orf143{{!}}C9orf145{{!}}C9orf154{{!}}MOTA{{!}}TILRR{{!}}TRIGNO2 | ||
|gene_description=FRAS1 related extracellular matrix 1 | |gene_description=FRAS1 related extracellular matrix 1 | ||
|gene_name=FREM1 | |gene_name=FREM1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000164946 | |nearest_ensembl=ENSG00000164946 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_163238 | ||
|nearest_refseq=NM_144966 | |nearest_refseq=NM_144966 | ||
|nearest_unigene=Hs.50850 | |nearest_unigene=Hs.50850 | ||
|num_trans=0 | |||
|species=human | |||
|start=14918268 | |||
|start_of_center_position=14918270 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100060.1 | |tss_id=hg_100060.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:09, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -7275 |
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| Nearest PromoterID: | NR_163238 |
| Entrez ID: | 158326 |
| Nearest Unigene: | Hs.50850 |
| Nearest Refseq: | NM_144966 |
| Nearest Ensembl: | ENSG00000164946 |
| Gene Name: | FREM1 |
| Gene Alias: | BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 |
| Gene Description: | FRAS1 related extracellular matrix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |