TSS: Mm 162093.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001085348:3 uc009syy.1:3 ENSMUST00000184746.1:9 ENSMUST00000072167.9:-13 |chr=chrX |cpg_percent=0.035 |distance=3 |distance_to_tss=-3 |end=37530465 |...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_001085348 | |OTTMUSG00000017141= | ||
|Rhox2.5= | |||
|Rhox2d= | |||
|all_trans=NM_001085348:3 ENSMUST00000184746.1:9 ENSMUST00000072167.9:-13 | |||
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=37530465 | |end=37530465 | ||
|end_of_center_position=37530465 | |||
|entrez_id=100040016 | |entrez_id=100040016 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
|gene_alias= | |gene_alias=Rhox2.5{{!}}Rhox2d | ||
|gene_description=reproductive homeobox 2E | |gene_description=reproductive homeobox 2E | ||
|gene_id=100040016 | |gene_id=100040016 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_001085348 | |nearest_refseq=NM_001085348 | ||
|nearest_unigene=Mm.455498 | |nearest_unigene=Mm.455498 | ||
|num_trans= | |num_trans=3 | ||
|species=mouse | |species=mouse | ||
|start=37530464 | |start=37530464 | ||
|start_of_center_position=37530464 | |||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001085348 | |transcript_name=NM_001085348.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_162093.1 | |tss_id=mm_162093.1 | ||
Latest revision as of 09:15, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -3 |
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| Nearest PromoterID: | NM_001085348 |
| Entrez ID: | 100040016 |
| Nearest Unigene: | Mm.455498 |
| Nearest Refseq: | NM_001085348 |
| Nearest Ensembl: | ENSMUSG00000096788 |
| Gene Name: | reproductive homeobox 2E |
| Gene Alias: | Rhox2.5|Rhox2d |
| Gene Description: | reproductive homeobox 2E |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.