TSS: Rfhg 131089.1: Difference between revisions

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|gene_description=transforming acidic coiled-coil containing protein 2
|gene_description=transforming acidic coiled-coil containing protein 2
|gene_id=
|gene_id=
|gene_name=TACC2
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 20:41, 13 March 2025

Basic information about the TSS


TSS ID:rfhg_131089.1
Species:human
Chr:chr10
Start:122163597
End:122163645
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2401017,EH38E1506184)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_206860.3:0
NM_006997.4:0
NM_001291878.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000368999.5:-7
  • ENST00000369004.7:129
  • BC141837:129
  • BC142673:129
  • ENST00000360561.7:-171
  • BC039311:-171
  • ENST00000260733.7:199
  • AF095791:199
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-9
Nearest PromoterID:NM_001291878
Entrez ID:10579
Nearest Unigene:Hs.501252
Nearest Refseq:NM_006997
Nearest Ensembl:ENSG00000138162
Gene Name:
Gene Alias:AZU-1|ECTACC
Gene Type:protein-coding
CpG%:0.083333
GC%:0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):