TSS: Rfhg 132012.1: Difference between revisions
From referenceTSS
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|gene_description=secretoglobin family 1C member 1 | |gene_description=secretoglobin family 1C member 1 | ||
|gene_id=147199 | |gene_id=147199 | ||
|gene_name= | |gene_name=secretoglobin family 1C member 1 | ||
|gene_source=HGNC:18394 | |gene_source=HGNC:18394 | ||
|gene_symbol=SCGB1C1 | |gene_symbol=SCGB1C1 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000342878 | |transcript_name=ENST00000342878.3 | ||
|tss_cluster_detected=2 | |tss_cluster_detected=2 | ||
|tss_id=rfhg_132012.1 | |tss_id=rfhg_132012.1 | ||
Latest revision as of 20:57, 13 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5|EPD | |||||||||||||
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| Protocol | CAGE|TSS_database | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_145651 |
| Entrez ID: | 147199 |
| Nearest Unigene: | Hs.127059 |
| Nearest Refseq: | NM_145651 |
| Nearest Ensembl: | ENSG00000188076 |
| Gene Name: | secretoglobin family 1C member 1 |
| Gene Alias: | RYD5 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.578947 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.