TSS: Hg 102668.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=2531 |entrez_id=3934 |gc_percent=0.562189 |gene_alias=24p3|MSFI|NGAL|p25 |gene_description=lipocalin 2 |gene_name=LCN2 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
|MSFI= | |||
|NGAL= | |||
|chr=chr9 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=2508 | |||
|end=128151974 | |||
|end_of_center_position=128151962 | |||
|entrez_id=3934 | |entrez_id=3934 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=24p3 | |gene_alias=24p3{{!}}MSFI{{!}}NGAL{{!}}p25 | ||
|gene_description=lipocalin 2 | |gene_description=lipocalin 2 | ||
|gene_name=LCN2 | |gene_name=LCN2 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_005564 | |nearest_refseq=NM_005564 | ||
|nearest_unigene=Hs.204238 | |nearest_unigene=Hs.204238 | ||
|num_trans=0 | |||
|p25= | |||
|species=human | |||
|start=128151948 | |||
|start_of_center_position=128151961 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102668.1 | |tss_id=hg_102668.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:09, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2508 |
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| Nearest PromoterID: | NM_005564 |
| Entrez ID: | 3934 |
| Nearest Unigene: | Hs.204238 |
| Nearest Refseq: | NM_005564 |
| Nearest Ensembl: | ENSG00000148346 |
| Gene Name: | LCN2 |
| Gene Alias: | 24p3|MSFI|NGAL|p25 |
| Gene Description: | lipocalin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |