TSS: Rfhg 155384.1: Difference between revisions

Latest revision as of 04:33, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_155384.1
Species:	human
Chr:	chr12

Start:	101408067
End:	101408116
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D2598209,EH38E1637825)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_001301068.1:247
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	BX537387:275 BC007000:292 ENST00000261636.13:295 NM_001177.6:295 ENST00000551092.5:305 AK299062:310 ENST00000549302.1:311 ENST00000551671.5:314 ENST00000551688.1:318 L28997:320 ENST00000539055.5:321 ENST00000549283.1:321 AK302911:321 AK311793:322 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-271
Nearest PromoterID:	NM_001301068
Entrez ID:	400
Nearest Unigene:	Hs.372616
Nearest Refseq:	NM_001177
Nearest Ensembl:	ENSG00000120805
Gene Name:
Gene Alias:	ARFL1
Gene Type:	protein-coding
CpG%:	0.142857
GC%:	0.760000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=ADP ribosylation factor like GTPase 1
 |gene_id=
-|gene_name=ARL1
+|gene_name=
 |gene_source=
 |gene_symbol=