TSS: Rfhg 157543.1: Difference between revisions

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|gene_description=uncharacterized LOC100506691
|gene_description=uncharacterized LOC100506691
|gene_id=100506691
|gene_id=100506691
|gene_name=LOC100506691
|gene_name=long intergenic non-protein coding RNA 2985
|gene_source=EntrezGene:100506691
|gene_source=EntrezGene:100506691
|gene_symbol=LINC02985
|gene_symbol=LINC02985

Latest revision as of 05:14, 14 March 2025

Basic information about the TSS


TSS ID:rfhg_157543.1
Species:human
Chr:chr12
Start:122063388
End:122063431
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2617047,EH38E1651316)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000660647.1:0
GeneID:100506691
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000540968.1:-39
  • ENST00000538790.1:-82
  • NR_135044.1:-98
view more...
Gene_name:long intergenic non-protein coding RNA 2985
Gene_symbol:LINC02985
Gene_synonyms:
Gene_source:EntrezGene:100506691



TATA-Box annotation


Distance to TSS:119
Nearest PromoterID:NR_135044
Entrez ID:100506691
Nearest Unigene:Hs.536336
Nearest Refseq:NR_135044
Nearest Ensembl:ENSG00000256546
Gene Name:long intergenic non-protein coding RNA 2985
Gene Alias:-
Gene Type:ncRNA
CpG%:0.023256
GC%:0.568182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.