TSS: Rfhg 163776.1: Difference between revisions
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|gene_description=uncharacterized LOC105370401 | |gene_description=uncharacterized LOC105370401 | ||
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|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
Latest revision as of 07:10, 14 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D2699020,EH38E1702049) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 151667 |
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| Nearest PromoterID: | NR_148363 |
| Entrez ID: | 105370401 |
| Nearest Unigene: | Hs.435144 |
| Nearest Refseq: | NR_148361 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.500000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "MA873693:4 LY596105:4 AB976903:9 AB976722:10 AB976945:10 AB977051:10 AB976970:10 AB977096:10 ENST00000390465.2:11 AB305773:11 AB305734:11 AB305727:11 AB305672:11 BC070337:11 AB305777:12 AB749824:12 AB976742:12 AB977310:12 AB977268:15 AB306025:16 AB749922:16 Z29614:16 AB976927:16 AB749826:17 AB306087:23 MA873694:23 LY596106:23 AB306102:24 MA873695:24 LY596107:24 AB306009:35 MA873698:38 LY596110:38 MA873699:48 LY596111:48 AB306023:50 M27375:57 AY360462:57 AY375451:57 EU427376:57 FJ795365:57 L34703:57 MN782533:57 AB977345:80 AB977376:133 AB306100:136 MA873706:344 LY596118:344 Z29579:362 Y15199:434 GQ502856:446 GQ502833:446 KX076833:471 KX076066:471 KX075347:471 KX076494:471 KX075332:471 KX076522:471 KX075474:471 KX074310:471 KX074447:471 KX075968:471 KX074573:471 KX076109:471 KX074789:471 KX076400:471 KX075133:471 KX075823:471 KX077170:471 KX074346:471 KX075955:471 KX076498:471 KX076567:472 KX076409:472 KX076076:472 KX074446:472 KX075860:472 U39095:474 KX075894:475 GQ502825:480 EU885178:485 U39118:486 GQ502826:486 KX076341:488 KX076806:488 KX075494:488 KX075896:488 KX076439:488 KX076952:488 KX074409:488 KX075891:488 KX074335:488 KX076930:488 KX074368:488 KX074985:488 KX075008:488 KX075169:488 KX075174:488 KX076883:489 AB977167:489 AB977228:489 AB976917:489 KX074517:496 AB977397:500" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.