TSS: Hg 100066.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=80756 |entrez_id=158219 |gc_percent=0.40796 |gene_alias=C9orf52 |gene_description=tetratricopeptide repeat domain 39B |gene_name=TT...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF355387:-46 MA590964:-46 LF355386:184 MA590963:184 LF355388:-228 MA590965:-228 LF355389:-389 MA590966:-389 LF355385:410 MA590962:410 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=-46 | ||
|distance_to_tss=80774 | |||
|end=15169444 | |||
|end_of_center_position=15169444 | |||
|entrez_id=158219 | |entrez_id=158219 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
Line 12: | Line 17: | ||
|nearest_refseq=NM_152574 | |nearest_refseq=NM_152574 | ||
|nearest_unigene=Hs.563630 | |nearest_unigene=Hs.563630 | ||
|num_trans=10 | |||
|species=human | |||
|start=15169443 | |||
|start_of_center_position=15169443 | |||
|strand=- | |||
|transcript_name=LF355387 MA590964 | |||
|tss_classification=no | |||
|tss_id=hg_100066.1 | |tss_id=hg_100066.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 17:29, 11 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 80774 |
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Nearest PromoterID: | NM_001168342 |
Entrez ID: | 158219 |
Nearest Unigene: | Hs.563630 |
Nearest Refseq: | NM_152574 |
Nearest Ensembl: | ENSG00000155158 |
Gene Name: | TTC39B |
Gene Alias: | C9orf52 |
Gene Description: | tetratricopeptide repeat domain 39B |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.40796 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |