TSS: Rfhg 181602.1: Difference between revisions

Latest revision as of 12:41, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_181602.1
Species:	human
Chr:	chr16

Start:	18926121
End:	18926152
Strand:	-

Source datasets

DRA013844

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000532700.6:-6
GeneID:	23049
HGNC/MGI_ID:	HGNC:30045
UniProt_ID:	E9PNP6
Nearer transcript ids and distances:	BC156497:80 ENST00000567737.1:82 ENST00000446231.7:-256 NM_015092.5:-256 AB061371:-264 ENST00000569122.1:371 view more...

Gene_name:	SMG1 nonsense mediated mRNA decay associated PI3K related kinase
Gene_symbol:	SMG1
Gene_synonyms:	ATX KIAA0421 LIP
Gene_source:	HGNC:30045

TATA-Box annotation

Distance to TSS:	268
Nearest PromoterID:	NM_015092
Entrez ID:	23049
Nearest Unigene:	Hs.460179
Nearest Refseq:	NM_015092
Nearest Ensembl:	ENSG00000157106
Gene Name:	SMG1 nonsense mediated mRNA decay associated PI3K related kinase
Gene Alias:	61E3.4\|ATX\|LIP
Gene Type:	protein-coding
CpG%:	0.096774
GC%:	0.812500
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=SMG1 nonsense mediated mRNA decay associated PI3K related kinase
 |gene_id=23049
-|gene_name=SMG1
+|gene_name=SMG1 nonsense mediated mRNA decay associated PI3K related kinase
 |gene_source=HGNC:30045
 |gene_symbol=SMG1