TSS: Rfhg 182880.1: Difference between revisions
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Latest revision as of 13:07, 14 March 2025
Basic information about the TSS
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| Source datasets | DRA013844 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS,CTCF-bound (EH38D2858263,EH38E1811167) |
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| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1598 |
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| Nearest PromoterID: | NM_001243177 |
| Entrez ID: | 226 |
| Nearest Unigene: | Hs.513490 |
| Nearest Refseq: | NM_000034 |
| Nearest Ensembl: | ENSG00000149925 |
| Gene Name: | |
| Gene Alias: | ALDA|GSD12|HEL-S-87p |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.500000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "CR541880:-103 CR536528:-103 CU680642:-104 KJ890659:-104 KR709335:-104 KR709336:-104 KR709337:-104 LF208721:-104 MA444298:-104 DQ894246:-107 DQ891065:-107 LF322060:-111 MA557637:-111 LF209534:-119 MA445111:-119 ENST00000564688.1:144 DQ600112:231 LF351598:250 MA587175:250 LF329318:265 MA564895:265 LF322059:268 MA557636:268 BC000367:291 BC016170:291" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.