TSS: Rfhg 190785.1: Difference between revisions

Latest revision as of 15:34, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_190785.1
Species:	human
Chr:	chr17

Start:	19460957
End:	19460974
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D2916167,EH38E1851516)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000658570.1:0 ENST00000456537.6:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000664238.1:7 ENST00000421796.2:-10 ENST00000668984.1:-15 ENST00000585389.2:-18 ENST00000609249.5:-21 ENST00000655270.1:-46 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	49733
Nearest PromoterID:	NM_007148
Entrez ID:	7732
Nearest Unigene:	Hs.189482
Nearest Refseq:	NM_007148
Nearest Ensembl:	ENSG00000128482
Gene Name:
Gene Alias:	BFP\|ZNF179
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=ring finger protein 112
 |gene_id=
-|gene_name=RNF112
+|gene_name=
 |gene_source=
 |gene_symbol=