TSS: Mm 169425.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007trz.1:64 uc029sju.1:64 U07878:64 L21700:306 X76971:306 uc033gqn.1:473 KC202833:473 |chr=chr14 |cpg_percent=0.01 |distance=64 |distance_to_tss=-8742...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |Mor28= | ||
|Or28= | |||
|all_trans=MGI:3822547 | |||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=64 | |distance=64 | ||
|distance_to_tss=- | |distance_to_tss=-330522 | ||
|end=53369990 | |end=53369990 | ||
|entrez_id= | |end_of_center_position=53369988 | ||
|entrez_id=102632039 | |||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=predicted gene, 30214 | ||
|gene_id=634322 | |gene_id=634322 | ||
|gene_name=T cell receptor alpha variable 14D-3-DV8 | |gene_name=T cell receptor alpha variable 14D-3-DV8 | ||
| Line 15: | Line 18: | ||
|gene_symbol=Trav14d-3-dv8 | |gene_symbol=Trav14d-3-dv8 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:3822547 | |hgnc_mgi_id=MGI:3822547 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_155501 | ||
|nearest_refseq= | |nearest_refseq=NR_155501 | ||
|nearest_unigene=Mm. | |nearest_unigene=Mm.410779 | ||
|num_trans= | |num_trans=634322 | ||
|species=mouse | |species=mouse | ||
|start=53369985 | |start=53369985 | ||
|start_of_center_position=53369987 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=U07878 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_169425.1 | |tss_id=mm_169425.1 | ||
Latest revision as of 11:53, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -330522 |
|---|---|
| Nearest PromoterID: | NR_155501 |
| Entrez ID: | 102632039 |
| Nearest Unigene: | Mm.410779 |
| Nearest Refseq: | NR_155501 |
| Nearest Ensembl: | |
| Gene Name: | T cell receptor alpha variable 14D-3-DV8 |
| Gene Alias: | - |
| Gene Description: | predicted gene, 30214 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.