TSS: Rfhg 212984.1: Difference between revisions

Latest revision as of 22:37, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_212984.1
Species:	human
Chr:	chr19

Start:	43575619
End:	43575629
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3064721,EH38E1956230)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF384227:41 MA619804:41
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	AK315332:52 ENST00000543982.5:56 AK300163:56 AK293542:63 ENST00000262887.10:92 ENST00000594107.1:92 NM_006297.3:92 ENST00000595789.5:113 ENST00000594511.1:115 AB208781:118 BC023593:154 AB384718:160 CR456728:161 M36089:-377 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-46
Nearest PromoterID:	NM_006297
Entrez ID:	7515
Nearest Unigene:	Hs.98493
Nearest Refseq:	NM_006297
Nearest Ensembl:	ENSG00000073050
Gene Name:
Gene Alias:	RCC\|SCAR26
Gene Type:	protein-coding
CpG%:	0.100000
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=X-ray repair cross complementing 1
 |gene_id=
-|gene_name=XRCC1
+|gene_name=
 |gene_source=
 |gene_symbol=