TSS: Mm 170826.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC106197:-5 ENSMUST00000118012.8:-9 BC087864:-9 BC083167:20 NM_001205057:-21 uc008ogt.2:-21 |chr=chr2 |cpg_percent=0.015 |distance=-5 |distance_to_tss=2...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:3709624 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
|end=176798627 | |end=176798627 | ||
|end_of_center_position=176798624 | |||
|entrez_id=100039123 | |entrez_id=100039123 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description=predicted gene 14295 | |gene_description=predicted gene 14295 | ||
|gene_id=100039123 | |gene_id=100039123 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001205057 | |nearest_refseq=NM_001205057 | ||
|nearest_unigene=Mm.389409 | |nearest_unigene=Mm.389409 | ||
|num_trans= | |num_trans=100039123 | ||
|species=mouse | |species=mouse | ||
|start=176798620 | |start=176798620 | ||
|start_of_center_position=176798623 | |||
|strand=+ | |strand=+ | ||
|transcript_name=BC106197 | |transcript_name=BC106197 | ||
Latest revision as of 12:23, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_001205057 |
| Entrez ID: | 100039123 |
| Nearest Unigene: | Mm.389409 |
| Nearest Refseq: | NM_001205057 |
| Nearest Ensembl: | ENSMUSG00000078877 |
| Gene Name: | predicted gene 14295 |
| Gene Alias: | - |
| Gene Description: | predicted gene 14295 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.