TSS: Hg 10275.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=61665 |entrez_id=148345 |gc_percent=0.61194 |gene_alias=- |gene_description=chromosome 1 open reading frame 127 |gene_name=C1or...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=46315 | |||
|end=10920374 | |||
|end_of_center_position=10920373 | |||
|entrez_id=148345 | |entrez_id=148345 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000175262 | |nearest_ensembl=ENSG00000175262 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001366227 | ||
|nearest_refseq=NM_173507 | |nearest_refseq=NM_173507 | ||
|nearest_unigene=Hs.127026 | |nearest_unigene=Hs.127026 | ||
|num_trans=0 | |||
|species=human | |||
|start=10920370 | |||
|start_of_center_position=10920372 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10275.1 | |tss_id=hg_10275.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:11, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 46315 |
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| Nearest PromoterID: | NM_001366227 |
| Entrez ID: | 148345 |
| Nearest Unigene: | Hs.127026 |
| Nearest Refseq: | NM_173507 |
| Nearest Ensembl: | ENSG00000175262 |
| Gene Name: | C1orf127 |
| Gene Alias: | - |
| Gene Description: | chromosome 1 open reading frame 127 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |