TSS: Rfhg 239449.1: Difference between revisions

Latest revision as of 06:34, 15 March 2025

Basic information about the TSS

TSS ID:	rfhg_239449.1
Species:	human
Chr:	chrX

Start:	136196784
End:	136196794
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D4314626,EH38E2770480)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_001159701.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000539015.5:-27 AK301642:-27 ENST00000370676.7:232 ENST00000370683.6:253 NM_001330659.2:253 NM_001159699.2:253 AK299381:256 ENST00000630684.2:259 AK299450:259 AK299379:259 ENST00000477204.5:269 BC088369:269 EU832162:317 EU832256:317 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NM_001159701
Entrez ID:	2273
Nearest Unigene:	Hs.435369
Nearest Refseq:	NM_001449
Nearest Ensembl:	ENSG00000022267
Gene Name:
Gene Alias:	FCMSU\|FHL-1\|FHL1A\|FHL1B\|FLH1A\|KYOT\|RBMX1A\|RBMX1B\|SLIM\|SLIM-1\|SLIM1\|SLIMMER\|XMPMA
Gene Type:	protein-coding
CpG%:	0.100000
GC%:	0.272727
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=four and a half LIM domains 1
 |gene_id=
-|gene_name=FHL1
+|gene_name=
 |gene_source=
 |gene_symbol=