TSS: Mm 1864.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000162353.7:-144 uc007btk.1:-144 uc007btl.1:-144 uc007btm.1:-144 AK142678:-144 |chr=chr1 |cpg_percent=0.02 |distance=-144 |distance_to_tss=3762...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:3612703 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=3762 | |distance_to_tss=3762 | ||
|end=85106093 | |end=85106093 | ||
|end_of_center_position=85106092 | |||
|entrez_id=381287 | |entrez_id=381287 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_213615 | |nearest_refseq=NM_213615 | ||
|nearest_unigene=Mm.487565 | |nearest_unigene=Mm.487565 | ||
|num_trans= | |num_trans=621875 | ||
|species=mouse | |species=mouse | ||
|start=85106089 | |start=85106089 | ||
|start_of_center_position=85106091 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000162353.7 | |transcript_name=ENSMUST00000162353.7 AK142678 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_1864.1 | |tss_id=mm_1864.1 | ||
Latest revision as of 13:46, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3762 |
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| Nearest PromoterID: | NM_213615 |
| Entrez ID: | 381287 |
| Nearest Unigene: | Mm.487565 |
| Nearest Refseq: | NM_213615 |
| Nearest Ensembl: | ENSMUSG00000089844 |
| Gene Name: | RIKEN cDNA A530040E14 gene |
| Gene Alias: | Gm1888 |
| Gene Description: | RIKEN cDNA A530032D15Rik gene |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.