TSS: Rfhg 42501.1: Difference between revisions

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|gene_description=Raf-1 proto-oncogene, serine/threonine kinase
|gene_description=Raf-1 proto-oncogene, serine/threonine kinase
|gene_id=
|gene_id=
|gene_name=RAF1
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 12:44, 15 March 2025

Basic information about the TSS


TSS ID:rfhg_42501.1
Species:human
Chr:chr3
Start:12662792
End:12662800
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3394441,EH38E2179360)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF365240:43
MA600817:43
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF365241:-203
  • MA600818:-203
  • LF365239:299
  • MA600816:299
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:712
Nearest PromoterID:NM_001354690
Entrez ID:5894
Nearest Unigene:Hs.159130
Nearest Refseq:NM_002880
Nearest Ensembl:ENSG00000132155
Gene Name:
Gene Alias:CMD1NN|CRAF|NS5|Raf-1|c-Raf
Gene Type:protein-coding
CpG%:0.000000
GC%:0.222222
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):