TSS: Rfhg 58301.1: Difference between revisions

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|gene_description=casein alpha s1
|gene_description=casein alpha s1
|gene_id=1446
|gene_id=1446
|gene_name=CSN1S1
|gene_name=casein alpha s1
|gene_source=HGNC:2445
|gene_source=HGNC:2445
|gene_symbol=CSN1S1
|gene_symbol=CSN1S1
Line 35: Line 35:
|strand=+
|strand=+
|tata_box=
|tata_box=
|transcript_name=ENST00000246891.9 NM_001025104.2 NM_001890.2
|transcript_name=ENST00000246891.9
|tss_cluster_detected=2
|tss_cluster_detected=2
|tss_id=rfhg_58301.1
|tss_id=rfhg_58301.1

Latest revision as of 17:43, 15 March 2025

Basic information about the TSS

TSS ID:rfhg_58301.1
Species:human
Chr:chr4
Start:69931067
End:69931071
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000246891.9:0
GeneID:1446
HGNC/MGI_ID:HGNC:2445
UniProt_ID:P47710
Nearer transcript ids and distances:
  • X78416:10
  • BC128227:21
  • BC128228:21
  • U23157:31
view more...
Gene_name:casein alpha s1
Gene_symbol:CSN1S1
Gene_synonyms:
Gene_source:HGNC:2445



TATA-Box annotation

Distance to TSS:1
Nearest PromoterID:NM_001025104
Entrez ID:1446
Nearest Unigene:Hs.3155
Nearest Refseq:NM_001890
Nearest Ensembl:ENSG00000126545
Gene Name:casein alpha s1
Gene Alias:CASA|CSN1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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