TSS: Hg 100077.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=38628 |entrez_id=11168 |gc_percent=0.308458 |gene_alias=DFS70|LEDGF|PAIP|PSIP2|p52|p75 |gene_description=PC4 and SFRS1 interacti...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LEDGF= | |||
|PAIP= | |||
|PSIP2= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=38628 | |distance_to_tss=38628 | ||
|end=15471666 | |||
|end_of_center_position=15471661 | |||
|entrez_id=11168 | |entrez_id=11168 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
|gene_alias=DFS70 | |gene_alias=DFS70{{!}}LEDGF{{!}}PAIP{{!}}PSIP2{{!}}p52{{!}}p75 | ||
|gene_description=PC4 and SFRS1 interacting protein 1 | |gene_description=PC4 and SFRS1 interacting protein 1 | ||
|gene_name=PSIP1 | |gene_name=PSIP1 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_021144 | |nearest_refseq=NM_021144 | ||
|nearest_unigene=Hs.658434 | |nearest_unigene=Hs.658434 | ||
|num_trans=0 | |||
|p52= | |||
|p75= | |||
|species=human | |||
|start=15471655 | |||
|start_of_center_position=15471660 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100077.1 | |tss_id=hg_100077.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:09, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 38628 |
|---|---|
| Nearest PromoterID: | NM_021144 |
| Entrez ID: | 11168 |
| Nearest Unigene: | Hs.658434 |
| Nearest Refseq: | NM_021144 |
| Nearest Ensembl: | ENSG00000164985 |
| Gene Name: | PSIP1 |
| Gene Alias: | DFS70|LEDGF|PAIP|PSIP2|p52|p75 |
| Gene Description: | PC4 and SFRS1 interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |