TSS: Rfhg 74820.1: Difference between revisions

Latest revision as of 22:57, 15 March 2025

Basic information about the TSS

TSS ID:	rfhg_74820.1
Species:	human
Chr:	chr5

Start:	157107429
End:	157107459
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D3781697,EH38E2424333)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	MA871648:-476 LY594060:-476
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	MA871647:-497 LY594059:-497 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	1600
Nearest PromoterID:	NM_032782
Entrez ID:	84868
Nearest Unigene:	Hs.710500
Nearest Refseq:	NM_032782
Nearest Ensembl:	ENSG00000135077
Gene Name:
Gene Alias:	CD366\|HAVcr-2\|KIM-3\|SPTCL\|TIM3\|TIMD-3\|TIMD3\|Tim-3
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.387097
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):	16(CTCTTTTTAAGC,-,0.00),18(CTTTTTAAGCAG,+,0.00)

@@ Line 16: / Line 16: @@
 |gene_description=hepatitis A virus cellular receptor 2
 |gene_id=
-|gene_name=HAVCR2
+|gene_name=
 |gene_source=
 |gene_symbol=