TSS: Rfhg 80410.1: Difference between revisions

Latest revision as of 00:41, 16 March 2025

Basic information about the TSS

TSS ID:	rfhg_80410.1
Species:	human
Chr:	chr6

Start:	30940971
End:	30940980
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D3830736,EH38E2458776)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000462446.6:0
GeneID:	135656
HGNC/MGI_ID:	HGNC:21666
UniProt_ID:	E9PEI6
Nearer transcript ids and distances:	ENST00000304311.3:20

Gene_name:	mucin like 3
Gene_symbol:	MUCL3
Gene_synonyms:	C6orf37 PBLT bCX105N19.6
Gene_source:	HGNC:21666

TATA-Box annotation

Distance to TSS:	2
Nearest PromoterID:	NM_080870
Entrez ID:	135656
Nearest Unigene:	Hs.631993
Nearest Refseq:	NM_080870
Nearest Ensembl:	ENSG00000168631
Gene Name:	mucin like 3
Gene Alias:	C6orf37\|DPCR1\|PBLT
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=mucin like 3
 |gene_id=135656
-|gene_name=MUCL3
+|gene_name=mucin like 3
 |gene_source=HGNC:21666
 |gene_symbol=MUCL3
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000462446.6 NM_080870.4
+|transcript_name=ENST00000462446.6
 |tss_cluster_detected=2
 |tss_id=rfhg_80410.1