TSS: Rfhg 98283.1: Difference between revisions
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Latest revision as of 06:16, 16 March 2025
Basic information about the TSS
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| Source datasets | PRJNA615891|PRJNA548673 | |||||||||||||
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| Protocol | TIF-seq2|SLIC_CAGE|CAGE|ReCappable-seq | |||||||||||||
| TSS cluster detected* | 4 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | dELS,CTCF-bound (EH38D4012963,EH38E2579154) |
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| Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 10840 |
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| Nearest PromoterID: | NM_182715 |
| Entrez ID: | 6856 |
| Nearest Unigene: | Hs.80919 |
| Nearest Refseq: | NM_006754 |
| Nearest Ensembl: | ENSG00000008282 |
| Gene Name: | |
| Gene Alias: | H-SP1|SYPL |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.200000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |