TSS: Mm 30829.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000029909.2:0 NM_172687:0 uc008sdj.1:0 BC060960:0 AK028680:0 AK170488:0 AK035318:0 AK166475:18 AK142287:36 |chr=chr4 |cpg_percent=0.075 |distan...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |C77934= | ||
|all_trans=MGI:101813 | |||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=36 | ||
|end=21879702 | |end=21879702 | ||
|end_of_center_position=21879683 | |||
|entrez_id=230027 | |entrez_id=230027 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=4732433J24 | |gene_alias=4732433J24{{!}}C77934 | ||
|gene_description=coenzyme Q3 methyltransferase | |gene_description=coenzyme Q3 methyltransferase | ||
|gene_id=230027 | |gene_id=230027 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_172687 | |nearest_refseq=NM_172687 | ||
|nearest_unigene=Mm.5662 | |nearest_unigene=Mm.5662 | ||
|num_trans= | |num_trans=230027 | ||
|species=mouse | |species=mouse | ||
|start=21879662 | |start=21879662 | ||
|start_of_center_position=21879682 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000029909.2 | |transcript_name=ENSMUST00000029909.2 BC060960 AK028680 AK170488 AK035318 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_30829.1 | |tss_id=mm_30829.1 | ||
Latest revision as of 18:15, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 36 |
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| Nearest PromoterID: | NM_172687 |
| Entrez ID: | 230027 |
| Nearest Unigene: | Mm.5662 |
| Nearest Refseq: | NM_172687 |
| Nearest Ensembl: | ENSMUSG00000028247 |
| Gene Name: | coenzyme Q3 methyltransferase |
| Gene Alias: | 4732433J24|C77934 |
| Gene Description: | coenzyme Q3 methyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.