TSS: Hg 102897.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TTF-I= | |||
|all_trans=HGNC:12397 | |||
|chr=chr9 | |||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance_to_tss= | |distance=0 | ||
|distance_to_tss=9 | |||
|end=132406853 | |||
|end_of_center_position=132406831 | |||
|entrez_id=7270 | |entrez_id=7270 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=TTF-1 | |gene_alias=TTF-1{{!}}TTF-I | ||
|gene_description=transcription termination factor 1 | |gene_description=transcription termination factor 1 | ||
|gene_name=TTF1 | |gene_id=7270 | ||
|gene_name=transcription termination factor 1 | |||
|gene_source=HGNC:12397 | |||
|gene_symbol=TTF1 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:12397 | |||
|nearest_ensembl=ENSG00000125482 | |nearest_ensembl=ENSG00000125482 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_134525 | ||
|nearest_refseq=NM_007344 | |nearest_refseq=NM_007344 | ||
|nearest_unigene=Hs.54780 | |nearest_unigene=Hs.54780 | ||
|num_trans=7270 | |||
|species=human | |||
|start=132406808 | |||
|start_of_center_position=132406830 | |||
|strand=- | |||
|transcript_name=ENST00000334270.3 ENST00000612514.4 BC127669 BC127670 BC143048 BC143049 AK302902 BC143821 BC050734 AK225119 BC062692 BC104639 | |||
|tss_classification=yes | |||
|tss_id=hg_102897.1 | |tss_id=hg_102897.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A024R8C1 A0A087WY09 B4DZG2 Q15361 | |||
}} | }} | ||
Latest revision as of 18:37, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9 |
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| Nearest PromoterID: | NR_134525 |
| Entrez ID: | 7270 |
| Nearest Unigene: | Hs.54780 |
| Nearest Refseq: | NM_007344 |
| Nearest Ensembl: | ENSG00000125482 |
| Gene Name: | transcription termination factor 1 |
| Gene Alias: | TTF-1|TTF-I |
| Gene Description: | transcription termination factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.