TSS: Hg 102915.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=15801 |entrez_id=11092 |gc_percent=0.40796 |gene_alias=C9orf9|Mast |gene_description=sperm acrosome associated 9 |gene_name=SPAC...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Mast= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=15794 | |||
|end=132894694 | |||
|end_of_center_position=132894693 | |||
|entrez_id=11092 | |entrez_id=11092 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=C9orf9 | |gene_alias=C9orf9{{!}}Mast | ||
|gene_description=sperm acrosome associated 9 | |gene_description=sperm acrosome associated 9 | ||
|gene_name=SPACA9 | |gene_name=SPACA9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165698 | |nearest_ensembl=ENSG00000165698 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001316897 | ||
|nearest_refseq=NM_018956 | |nearest_refseq=NM_018956 | ||
|nearest_unigene=Hs.62595 | |nearest_unigene=Hs.62595 | ||
|num_trans=0 | |||
|species=human | |||
|start=132894690 | |||
|start_of_center_position=132894692 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102915.1 | |tss_id=hg_102915.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 15794 |
---|---|
Nearest PromoterID: | NM_001316897 |
Entrez ID: | 11092 |
Nearest Unigene: | Hs.62595 |
Nearest Refseq: | NM_018956 |
Nearest Ensembl: | ENSG00000165698 |
Gene Name: | SPACA9 |
Gene Alias: | C9orf9|Mast |
Gene Description: | sperm acrosome associated 9 |
Gene Type: | protein-coding |
CpG%: | 0.02 |
GC%: | 0.40796 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |