TSS: Rfmm 34717.1: Difference between revisions

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|gene_description=
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|gene_name=Trmo
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|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 17:24, 19 March 2025

Basic information about the TSS


TSS ID:rfmm_34717.1
Species:mouse
Chr:chr4
Start:46389104
End:46389123
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2729358,EM10E1124286)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF271562:191
MA507139:191
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000151903.8:-295
  • AK044073:-297
  • ENSMUST00000086563.11:-300
  • NM_029086.2:-300
  • AK153576:-300
  • BC092543:-301
  • AK017931:-310
  • AK031727:-312
  • ENSMUST00000030015.6:-314
  • NM_001347095.1:-314
  • AK052584:-314
  • LF194384:-315
  • MA429961:-315
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:310
Nearest PromoterID:NM_029086.2
Entrez ID:Trmo
Nearest Unigene:XM_017320423
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):