TSS: Rfmm 40556.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 16: | Line 16: | ||
|gene_description= | |gene_description= | ||
|gene_id=15565 | |gene_id=15565 | ||
|gene_name= | |gene_name=5-hydroxytryptamine (serotonin) receptor 6 | ||
|gene_source=MGI:1196627 | |gene_source=MGI:1196627 | ||
|gene_symbol=Htr6 | |gene_symbol=Htr6 | ||
| Line 35: | Line 35: | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENSMUST00000105802.8 | |transcript_name=ENSMUST00000105802.8 AK134977 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfmm_40556.1 | |tss_id=rfmm_40556.1 | ||
Latest revision as of 19:02, 19 March 2025
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | PLS (EM10D2758098,EM10E1136575) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001377096.1 |
| Entrez ID: | Htr6 |
| Nearest Unigene: | NM_021358 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | 5-hydroxytryptamine (serotonin) receptor 6 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.176471 |
| GC%: | 0.722222 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.