TSS: Rfmm 65641.1: Difference between revisions

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Latest revision as of 01:56, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_65641.1
Species:mouse
Chr:chr7
Start:28076600
End:28076644
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2860740,EM10E1180720)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:1624
    Nearest PromoterID:XM_036153258.1
    Entrez ID:Paf1
    Nearest Unigene:XM_036153258
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.533333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):