TSS: Hg 102972.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=20238 |entrez_id=28 |gc_percent=0.527363 |gene_alias=A3GALNT|A3GALT1|GTB|NAGAT |gene_description="ABO, alpha 1-3-N-acetylgalacto...") |
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{{TSSDetail | {{TSSDetail | ||
|A3GALT1= | |||
|GTB= | |||
|NAGAT= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=20225 | |||
|end=133254981 | |||
|end_of_center_position=133254976 | |||
|entrez_id=28 | |entrez_id=28 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=A3GALNT | |gene_alias=A3GALNT{{!}}A3GALT1{{!}}GTB{{!}}NAGAT | ||
|gene_description= | |gene_description=ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase | ||
|gene_name=ABO | |gene_name=ABO | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
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|nearest_refseq=NM_020469 | |nearest_refseq=NM_020469 | ||
|nearest_unigene=Hs.654423 | |nearest_unigene=Hs.654423 | ||
|num_trans=0 | |||
|species=human | |||
|start=133254970 | |||
|start_of_center_position=133254975 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102972.1 | |tss_id=hg_102972.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:16, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20225 |
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| Nearest PromoterID: | NM_020469 |
| Entrez ID: | 28 |
| Nearest Unigene: | Hs.654423 |
| Nearest Refseq: | NM_020469 |
| Nearest Ensembl: | ENSG00000175164 |
| Gene Name: | ABO |
| Gene Alias: | A3GALNT|A3GALT1|GTB|NAGAT |
| Gene Description: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |