TSS: Rfmm 9648.1: Difference between revisions

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|gene_name=Ifi208
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|gene_symbol=
|gene_symbol=

Latest revision as of 10:31, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_9648.1
Species:mouse
Chr:chr1
Start:173501195
End:173501203
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1116930,EM10E0460517)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001379481.1:28
NM_001162938.2:28
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000182880.2:38
  • AK088880:38
  • ENSMUST00000085876.12:43
  • AK041099:43
  • AK036671:274
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:5
Nearest PromoterID:XM_011238729.3
Entrez ID:Ifi208
Nearest Unigene:XM_011238729
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):